Basic Information
Locus ID:
Seu_jg14368
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000003l | 2777037 | 2780309 | + | Seu_jg14368 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.13 | 51,275.38 Da | 44.69 | 91.44 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 183 | 422 | 4.6E-40 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 30 | 102 | 3.6E-8 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 163 | 408 | 2.91E-62 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 147 | 255 | 1.8E-33 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 15 | 104 | 3.0E-11 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 257 | 445 | 2.1E-35 | - |
| SMART | SM00220 | serkin_6 | 180 | 435 | 1.5E-23 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 180 | 466 | 30.647472 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1 | 104 | 12.641707 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 186 | 208 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G04500.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 37. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021756548.1 | cysteine-rich receptor-like protein kinase 27 isoform X1 [Chenopodium quinoa] | 0 |
| Q9XEC7 | Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana OX=3702 GN=CRK37 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803LIS2 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 3 | gene_8411, gene_8412, gene_8413 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg39968, Sbi_jg55298 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg14367, Seu_jg14368 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000035541, gene:ENSEOMG00000049013 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0022010, CQ.Regalona.r1.1AG0022030 |