Basic Information
Locus ID:
Seu_jg14308
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000003l | 2025305 | 2031324 | - | Seu_jg14308 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 110,557.18 Da | 34.64 | 99.83 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 189 | 210 | 1.2 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 480 | 499 | 0.2 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 286 | 345 | 3.1E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 713 | 987 | 7.8E-45 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 213 | 235 | 1.3 | IPR001611 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 115 | 151 | 3.6E-6 | IPR025875 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 88 | 1.4E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 705 | 989 | 1.35E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 407 | 635 | 1.33E-48 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 95 | 467 | 1.96E-71 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 353 | 645 | 1.7E-84 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 685 | 788 | 2.1E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 789 | 995 | 4.3E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 157 | 247 | 1.3E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 156 | 1.0E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 248 | 352 | 4.7E-31 | IPR032675 |
| SMART | SM00220 | serkin_6 | 712 | 990 | 4.1E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 163 | 187 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 284 | 307 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 114 | 138 | 87.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 452 | 476 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 499 | 523 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 356 | 380 | 42.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 211 | 235 | 38.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 308 | 331 | 32.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 712 | 990 | 37.912346 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 310 | 332 | 7.203709 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 833 | 845 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_021755306.1 | receptor protein kinase CLAVATA1-like [Chenopodium quinoa] | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A803N6X2 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology