Basic Information
Locus ID:
Seu_jg13754
Species & Taxonomic ID:
Salicornia europaea & 206448
Short Name:
CERK1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000016l | 1715662 | 1733680 | + | Seu_jg13754 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 60,752.56 Da | 32.30 | 90.22 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 260 | 527 | 4.4E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 238 | 528 | 1.62E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 330 | 547 | 1.9E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 244 | 329 | 1.1E-25 | - |
| SMART | SM00220 | serkin_6 | 259 | 532 | 1.3E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 259 | 532 | 39.099602 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 265 | 287 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 374 | 386 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_021771264.1 | chitin elicitor receptor kinase 1-like isoform X1 [Chenopodium quinoa] | 0 |
| A0A0P0XII1 | Chitin elicitor receptor kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9S1I0 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_010050 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology