Basic Information
Locus ID:
Seu_jg12679
Species & Taxonomic ID:
Salicornia europaea & 206448
Short Name:
CPK13
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000004l | 20951078 | 20960297 | - | Seu_jg12679 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 59,888.63 Da | 42.86 | 83.23 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 58 | 316 | 9.16799E-133 | - |
| Pfam | PF00069 | Protein kinase domain | 61 | 317 | 2.6E-74 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 363 | 423 | 1.5E-7 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 435 | 498 | 2.0E-15 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 35 | 341 | 2.29E-84 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 346 | 523 | 5.28E-43 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 60 | 144 | 3.2E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 145 | 325 | 4.0E-61 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 326 | 501 | 2.9E-51 | - |
| SMART | SM00220 | serkin_6 | 59 | 317 | 1.1E-95 | IPR000719 |
| SMART | SM00054 | efh_1 | 436 | 464 | 3.5E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 400 | 428 | 11.0 | IPR002048 |
| SMART | SM00054 | efh_1 | 472 | 500 | 7.2E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 364 | 392 | 8.6E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 468 | 503 | 14.262346 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 360 | 395 | 14.84815 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 59 | 317 | 46.209007 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 432 | 467 | 14.764463 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 65 | 88 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 373 | 385 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 179 | 191 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 445 | 457 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 481 | 493 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 47 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_021744705.1 | calcium-dependent protein kinase 13 [Chenopodium quinoa] | 0 |
| Q8W4I7 | Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana OX=3702 GN=CPK13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9RJG6 | Calcium-dependent protein kinase 13 OS=Spinacia oleracea OX=3562 GN=SOVF_065500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology