Basic Information
Locus ID:
Seu_jg12335
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000004l | 15186975 | 15195836 | - | Seu_jg12335 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 113,867.46 Da | 47.45 | 76.17 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 642 | 775 | 4.0E-51 | IPR001752 |
| Pfam | PF00307 | Calponin homology (CH) domain | 37 | 135 | 3.9E-9 | IPR001715 |
| Pfam | PF16796 | Microtubule binding | 470 | 630 | 4.8E-45 | IPR031852 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 32 | 133 | 1.07E-15 | IPR036872 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 484 | 813 | 2.55E-106 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 427 | 639 | 5.1E-55 | IPR036961 |
| Gene3D | G3DSA:1.10.418.10 | - | 35 | 153 | 1.6E-13 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 640 | 819 | 5.9E-63 | IPR036961 |
| Gene3D | G3DSA:1.20.5.170 | - | 322 | 359 | 5.9E-6 | - |
| SMART | SM00033 | ch_5 | 35 | 131 | 2.5E-5 | IPR001715 |
| SMART | SM00129 | kinesin_4 | 482 | 785 | 1.3E-139 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 33 | 136 | 16.430342 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 484 | 777 | 91.204468 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 727 | 748 | 2.4E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 647 | 664 | 2.4E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 559 | 580 | 2.4E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 678 | 696 | 2.4E-39 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 158 | 188 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 866 | 892 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 975 | 1005 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 174 | 188 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 962 | 1021 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 826 | 892 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 850 | 865 | - | - |
| Coils | Coil | Coil | 791 | 811 | - | - |
| Coils | Coil | Coil | 344 | 371 | - | - |
| Coils | Coil | Coil | 298 | 332 | - | - |
| Coils | Coil | Coil | 376 | 410 | - | - |
| Coils | Coil | Coil | 252 | 272 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63640.1 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain. | 0 |
| RefSeq | XP_021839012.1 | kinesin-like protein KIN-14J [Spinacia oleracea] | 0 |
| B3H6Z8 | Kinesin-like protein KIN-14J OS=Arabidopsis thaliana OX=3702 GN=KIN14J PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RNN7 | Kinesin-4 OS=Spinacia oleracea OX=3562 GN=SOVF_046070 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology