Basic Information
Locus ID:
Seu_jg12309
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000004l | 14814740 | 14816137 | + | Seu_jg12309 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.15 | 50,427.06 Da | 39.77 | 91.78 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18316 | BTB_POZ_KCTD-like | 18 | 97 | 3.3718E-15 | - |
| Pfam | PF02214 | BTB/POZ domain | 18 | 105 | 2.5E-16 | IPR003131 |
| SUPERFAMILY | SSF54695 | POZ domain | 15 | 105 | 1.22E-18 | IPR011333 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 186 | 462 | 2.59E-10 | IPR011047 |
| Gene3D | G3DSA:2.130.10.10 | - | 129 | 465 | 5.4E-7 | IPR015943 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 5 | 114 | 1.5E-22 | IPR011333 |
| SMART | SM00225 | BTB_4 | 16 | 114 | 7.4E-6 | IPR000210 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41330.1 | BTB/POZ domain with WD40/YVTN repeat-like protein. | 0 |
| RefSeq | XP_021845106.1 | BTB/POZ domain-containing protein At5g41330 [Spinacia oleracea] | 0 |
| Q9FN67 | BTB/POZ domain-containing protein At5g41330 OS=Arabidopsis thaliana OX=3702 GN=At5g41330 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9S0E2 | BTB domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_014230 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology