Basic Information
Locus ID:
Seu_jg1218
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000002l | 13582053 | 13585852 | + | Seu_jg1218 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.52 | 59,999.83 Da | 38.16 | 86.65 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 54 | 311 | 2.3685E-134 | - |
| Pfam | PF00069 | Protein kinase domain | 54 | 312 | 2.3E-75 | IPR000719 |
| Pfam | PF13833 | EF-hand domain pair | 373 | 421 | 0.0015 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 430 | 496 | 2.4E-13 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 341 | 521 | 1.36E-40 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 39 | 332 | 5.4E-86 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 56 | 139 | 7.4E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 140 | 320 | 3.7E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 321 | 498 | 9.2E-48 | - |
| SMART | SM00220 | serkin_6 | 54 | 312 | 2.0E-98 | IPR000719 |
| SMART | SM00054 | efh_1 | 359 | 387 | 8.3 | IPR002048 |
| SMART | SM00054 | efh_1 | 470 | 498 | 2.0E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 431 | 459 | 0.0042 | IPR002048 |
| SMART | SM00054 | efh_1 | 395 | 423 | 1.9 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 391 | 426 | 8.571685 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 466 | 501 | 13.927603 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 427 | 462 | 12.42125 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 54 | 312 | 49.615299 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 355 | 390 | 10.412781 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 60 | 87 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 440 | 452 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 174 | 186 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 404 | 416 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 479 | 491 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 0 |
| RefSeq | XP_010673649.2 | calcium-dependent protein kinase 8 [Beta vulgaris subsp. vulgaris] | 0 |
| Q42438 | Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CPK8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RJ89 | Calcium-dependent protein kinase OS=Spinacia oleracea OX=3562 GN=SOVF_065580 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology