Basic Information
Locus ID:
Seu_jg11408
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000004l | 2698550 | 2703327 | - | Seu_jg11408 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.45 | 47,871.48 Da | 32.83 | 124.99 | 0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 51 | 416 | 6.87641E-41 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 57 | 376 | 6.2E-19 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 57 | 420 | 3.79E-30 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 8 | 421 | 1.9E-29 | IPR036259 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 300 | 321 | 7.9E-7 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 360 | 383 | 7.9E-7 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 59 | 75 | 7.9E-7 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 144 | 165 | 7.9E-7 | IPR001958 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_021842890.1 | hippocampus abundant transcript-like protein 1 isoform X1 [Spinacia oleracea] | 0 |
| Q96MC6 | Hippocampus abundant transcript 1 protein OS=Homo sapiens OX=9606 GN=MFSD14A PE=1 SV=2 | 0 | |
| TrEMBL | A0A803LJ67 | MFS domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology