Basic Information
Locus ID:
Seu_jg11246
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000004l | 605366 | 611585 | + | Seu_jg11246 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.49 | 75,974.82 Da | 40.72 | 89.25 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 327 | 592 | 4.34087E-90 | - |
| Pfam | PF00069 | Protein kinase domain | 322 | 587 | 1.6E-40 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 155 | 239 | 1.6E-7 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 39 | 125 | 7.6E-14 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 299 | 591 | 4.32E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 143 | 241 | 7.1E-12 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 27 | 127 | 2.6E-15 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 398 | 606 | 3.5E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 281 | 397 | 1.9E-28 | - |
| SMART | SM00220 | serkin_6 | 321 | 590 | 4.4E-22 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 321 | 598 | 33.799355 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 138 | 242 | 12.397301 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 29 | 128 | 14.723691 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 440 | 452 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 327 | 349 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24540.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010682481.2 | proline-rich receptor-like protein kinase PERK15 [Beta vulgaris subsp. vulgaris] | 0 |
| Q1PEM5 | Proline-rich receptor-like protein kinase PERK3 OS=Arabidopsis thaliana OX=3702 GN=PERK3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6J0JKI9 | LOW QUALITY PROTEIN: proline-rich receptor-like protein kinase PERK2 OS=Raphanus sativus OX=3726 GN=LOC108807762 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_18060, gene_18061 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah013809 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g147530 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg45383 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg11246 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00002550 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl35133, Sgl40507 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG13.116 |