Basic Information
Locus ID:
Seu_jg11168
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000006l | 51635965 | 51637286 | + | Seu_jg11168 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.84 | 42,458.93 Da | 41.02 | 94.78 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 91 | 392 | 2.92551E-58 | IPR034161 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 92 | 274 | 5.9E-48 | IPR032861 |
| SUPERFAMILY | SSF50630 | Acid proteases | 87 | 392 | 3.9E-65 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 346 | 395 | 4.1E-7 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 68 | 273 | 8.5E-47 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 276 | 345 | 1.9E-8 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 92 | 395 | 28.535168 | IPR033121 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 98 | 118 | 2.2E-8 | IPR001461 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 315 | 326 | 2.2E-8 | IPR001461 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 268 | 281 | 2.2E-8 | IPR001461 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_021842793.1 | aspartic proteinase CDR1-like [Spinacia oleracea] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QJE5 | Peptidase A1 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_178820 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology