Basic Information
Locus ID:
Seu_jg11011
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000006l | 48114229 | 48116701 | - | Seu_jg11011 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.93 | 57,205.83 Da | 33.70 | 72.21 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 367 | 498 | 4.30315E-42 | IPR033734 |
| CDD | cd09612 | Jacalin | 22 | 152 | 1.26274E-44 | IPR033734 |
| CDD | cd09612 | Jacalin | 186 | 317 | 1.19484E-39 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 367 | 497 | 7.8E-31 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 22 | 152 | 3.0E-37 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 186 | 317 | 8.1E-31 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 11 | 151 | 1.96E-43 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 176 | 317 | 3.79E-40 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 354 | 497 | 2.35E-42 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 351 | 498 | 1.2E-51 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 9 | 154 | 1.6E-50 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 169 | 316 | 5.9E-48 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 367 | 499 | 1.2E-39 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 186 | 318 | 8.2E-38 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 22 | 153 | 1.3E-39 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 356 | 499 | 47.287865 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 11 | 153 | 52.96228 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 175 | 318 | 49.623287 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_021851045.1 | jacalin-related lectin 3-like [Spinacia oleracea] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9R5P4 | Jacalin-type lectin domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_109120 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology