Basic Information
Locus ID:
Seu_jg10705
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
BURP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000006l | 39790115 | 39792055 | + | Seu_jg10705 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.06 | 45,780.27 Da | 26.39 | 71.86 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03181 | BURP domain | 257 | 354 | 4.3E-16 | IPR004873 |
| Pfam | PF03181 | BURP domain | 361 | 411 | 7.4E-19 | IPR004873 |
| SMART | SM01045 | BURP_2 | 242 | 413 | 8.2E-12 | IPR004873 |
| ProSiteProfiles | PS51277 | BURP domain profile. | 226 | 337 | 9.29002 | IPR004873 |
| ProSiteProfiles | PS51277 | BURP domain profile. | 361 | 413 | 19.185408 | IPR004873 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25610.1 | BURP domain-containing protein. responsive to dehydration 22 (RD22) mediated by ABA | 0 |
| RefSeq | XP_048491899.1 | BURP domain-containing protein 5-like [Beta vulgaris subsp. vulgaris] | 0 |
| Q08298 | BURP domain protein RD22 OS=Arabidopsis thaliana OX=3702 GN=RD22 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8S0TN48 | BURP domain-containing protein OS=Olea europaea subsp. europaea OX=158383 GN=OLEA9_A004092 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah024283 |
| Amaranthaceae | Salicornia bigelovii | 12 | Sbi_jg14106, Sbi_jg27750, Sbi_jg32715, Sbi_jg32718 ... |
| Amaranthaceae | Salicornia europaea | 11 | Seu_jg10013, Seu_jg10691, Seu_jg10693, Seu_jg10705 ... |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00019651 |
| Amaranthaceae | Suaeda glauca | 20 | Sgl00053, Sgl00058, Sgl05126, Sgl05131, Sgl05152, Sgl10255 ... |