halophFGD

Basic Information

Locus ID: Seu_jg10099

Species & Taxonomic ID: Salicornia europaea & 206448

Genome Assembly:

Description: transposon protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
ptg000006l	22576248	22581912	+	Seu_jg10099

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.95	106,780.41 Da	33.67	71.46	-0.69

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF13960	Domain of unknown function (DUF4218)	328	392	4.4E-19	IPR025452
Pfam	PF03004	Plant transposase (Ptta/En/Spm family)	834	908	2.4E-13	IPR004252
Pfam	PF02992	Transposase family tnp2	133	182	1.6E-8	IPR004242
MobiDBLite	mobidb-lite	consensus disorder prediction	101	118	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	193	215	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	201	215	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	101	128	-	-

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_048493491.1	uncharacterized protein LOC125494036 [Beta vulgaris subsp. vulgaris]	0
TrEMBL	A0A803KUE9	PH domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Aizoaceae	Mesembryanthemum crystallinum	12	gene_11363, gene_14535, gene_15408, gene_22663, gene_25519 ... gene_25548, gene_25895, gene_4293, gene_7724, gene_8506, gene_8884, gene_9673
Amaranthaceae	Atriplex hortensis	3	Ah003715, Ah007052, Ah037022
Amaranthaceae	Salicornia bigelovii	43	Sbi_jg14545, Sbi_jg16734, Sbi_jg25736, Sbi_jg27296 ... Sbi_jg27496, Sbi_jg28264, Sbi_jg31840, Sbi_jg32201, Sbi_jg33024, Sbi_jg33025, Sbi_jg33340, Sbi_jg33415, Sbi_jg36423, Sbi_jg36424, Sbi_jg36425, Sbi_jg36974, Sbi_jg36975, Sbi_jg41359, Sbi_jg41360, Sbi_jg41836, Sbi_jg41853, Sbi_jg44230, Sbi_jg44592, Sbi_jg44594, Sbi_jg4618, Sbi_jg47772, Sbi_jg48469, Sbi_jg48630, Sbi_jg50062, Sbi_jg50347, Sbi_jg53713, Sbi_jg53806, Sbi_jg56783, Sbi_jg56787, Sbi_jg56861, Sbi_jg56995, Sbi_jg56996, Sbi_jg57313, Sbi_jg5801, Sbi_jg60107, Sbi_jg60108, Sbi_jg60472, Sbi_jg9872
Amaranthaceae	Salicornia europaea	44	Seu_jg10099, Seu_jg10376, Seu_jg10425, Seu_jg10537 ... Seu_jg10589, Seu_jg10685, Seu_jg10749, Seu_jg12732, Seu_jg12733, Seu_jg13260, Seu_jg13557, Seu_jg14710, Seu_jg1503, Seu_jg17149, Seu_jg17150, Seu_jg17688, Seu_jg17923, Seu_jg1937, Seu_jg22012, Seu_jg22544, Seu_jg22603, Seu_jg22604, Seu_jg24291, Seu_jg24617, Seu_jg24761, Seu_jg27629, Seu_jg27668, Seu_jg27854, Seu_jg27857, Seu_jg3817, Seu_jg3966, Seu_jg4158, Seu_jg4254, Seu_jg4255, Seu_jg4258, Seu_jg4594, Seu_jg6964, Seu_jg6967, Seu_jg7124, Seu_jg7125, Seu_jg7208, Seu_jg7249, Seu_jg7408, Seu_jg7906
Amaranthaceae	Suaeda aralocaspica	28	GOSA_00003916, GOSA_00009010, GOSA_00014468, GOSA_00015280 ... GOSA_00016667, GOSA_00016996, GOSA_00018082, GOSA_00020611, GOSA_00020945, GOSA_00021170, GOSA_00021449, GOSA_00021605, GOSA_00021942, GOSA_00022002, GOSA_00022100, GOSA_00022189, GOSA_00022795, GOSA_00023211, GOSA_00023212, GOSA_00024132, GOSA_00025157, GOSA_00025730, GOSA_00025988, GOSA_00026679, GOSA_00027311, GOSA_00029154, GOSA_00029236, GOSA_00029451
Amaranthaceae	Suaeda glauca	22	Sgl03949, Sgl03953, Sgl09073, Sgl13640, Sgl14611, Sgl18821 ... Sgl19779, Sgl20462, Sgl21870, Sgl27145, Sgl27146, Sgl36035, Sgl41298, Sgl65118, Sgl65121, Sgl65630, Sgl69538, Sgl69540, Sgl69926, Sgl79183, Sgl79353, Sgl81639
Amaranthaceae	Chenopodium album	2	gene:ENSEOMG00000009169, gene:ENSEOMG00000043177
Amaranthaceae	Chenopodium quinoa	5	CQ.Regalona.r1.5BG0012130, CQ.Regalona.r1.6BG0015370 ... CQ.Regalona.r1.7BG0019450, CQ.Regalona.r1.8BG0011260, CQ.Regalona.r1.9AG0008120
Arecaceae	Phoenix dactylifera	6	gene-LOC120104662, gene-LOC120104664, gene-LOC120105012 ... gene-LOC120107031, gene-LOC120108354, gene-LOC120110484
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate08g03110
Plumbaginaceae	Limonium bicolor	1	Lb7G34621
Poaceae	Paspalum vaginatum	1	gene-BS78_09G094000
Poaceae	Triticum dicoccoides	1	gene_TRIDC2AG017150
Portulacaceae	Portulaca oleracea	5	evm.TU.LG07.1296, evm.TU.LG08.476, evm.TU.LG11.534 ... evm.TU.LG11.847, evm.TU.LG20.1312
Solanaceae	Lycium barbarum	1	gene-LOC132609421