Basic Information
Locus ID:
Sbi_jg9522
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
cationic amino acid transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000001l | 19798841 | 19806208 | + | Sbi_jg9522 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.07 | 65,524.82 Da | 27.18 | 106.01 | 0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13906 | C-terminus of AA_permease | 509 | 559 | 1.7E-18 | IPR029485 |
| Pfam | PF13520 | Amino acid permease | 70 | 468 | 4.8E-49 | IPR002293 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 64 | 497 | 6.4E-98 | - |
| PIRSF | PIRSF006060 | AA_transporter | 50 | 576 | 1.9E-69 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21120.1 | amino acid transporter 1. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. | 0 |
| RefSeq | XP_021857110.1 | cationic amino acid transporter 1 [Spinacia oleracea] | 0 |
| Q84MA5 | Cationic amino acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=CAT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P5C140 | Amino acid/polyamine transporter OS=Parasponia andersonii OX=3476 GN=PanWU01x14_192470 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology