Basic Information
Locus ID:
Sbi_jg8666
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000001l | 3015062 | 3020079 | + | Sbi_jg8666 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.04 | 69,961.57 Da | 31.84 | 94.30 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 119 | 178 | 1.0E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 67 | 7.8E-13 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 298 | 564 | 2.6E-41 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 192 | 5.16E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 280 | 567 | 1.8E-72 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 208 | 2.4E-53 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 266 | 373 | 6.6E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 374 | 585 | 3.7E-59 | - |
| SMART | SM00220 | serkin_6 | 297 | 566 | 1.3E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 297 | 576 | 35.396496 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 303 | 325 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 416 | 428 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 599 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 582 | 639 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30520.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010687666.2 | probable LRR receptor-like serine/threonine-protein kinase At2g23950 isoform X3 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8VYT3 | Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QWT0 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_132580 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology