Basic Information
Locus ID:
Sbi_jg8082
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Glutelin type-A
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000030l | 56558103 | 56559942 | + | Sbi_jg8082 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 38,862.88 Da | 35.04 | 86.74 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02243 | cupin_11S_legumin_C | 198 | 353 | 2.40586E-75 | - |
| CDD | cd02242 | cupin_11S_legumin_N | 4 | 173 | 3.33201E-73 | - |
| Pfam | PF00190 | Cupin | 8 | 153 | 7.3E-28 | IPR006045 |
| Pfam | PF00190 | Cupin | 199 | 338 | 4.0E-23 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 11 | 345 | 1.8E-52 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 195 | 356 | 1.5E-51 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 3 | 194 | 2.3E-34 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 3 | 157 | 7.7E-32 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 195 | 339 | 6.2E-17 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 294 | 312 | 1.3E-15 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 316 | 333 | 1.3E-15 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 211 | 231 | 1.3E-15 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 258 | 274 | 1.3E-15 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 276 | 291 | 1.3E-15 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_021835696.1 | glutelin type-B 5-like [Spinacia oleracea] | 0 |
| P07730 | Glutelin type-A 2 OS=Oryza sativa subsp. japonica OX=39947 GN=GLUA2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R191 | 11S globulin OS=Spinacia oleracea OX=3562 GN=SOVF_118090 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology