Basic Information
Locus ID:
Sbi_jg7708
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000030l | 50230847 | 50232277 | - | Sbi_jg7708 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 51,586.16 Da | 37.23 | 89.71 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02214 | BTB/POZ domain | 18 | 116 | 2.5E-16 | IPR003131 |
| SUPERFAMILY | SSF54695 | POZ domain | 15 | 116 | 1.88E-17 | IPR011333 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 160 | 449 | 6.41E-10 | IPR036322 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 5 | 124 | 5.4E-22 | IPR011333 |
| Gene3D | G3DSA:2.130.10.10 | - | 144 | 475 | 6.9E-9 | IPR015943 |
| SMART | SM00225 | BTB_4 | 16 | 125 | 1.5E-6 | IPR000210 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41330.1 | BTB/POZ domain with WD40/YVTN repeat-like protein. | 0 |
| RefSeq | XP_021845106.1 | BTB/POZ domain-containing protein At5g41330 [Spinacia oleracea] | 0 |
| Q9FN67 | BTB/POZ domain-containing protein At5g41330 OS=Arabidopsis thaliana OX=3702 GN=At5g41330 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9S0E2 | BTB domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_014230 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology