Basic Information
Locus ID:
Sbi_jg7558
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Dual specificity protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000030l | 47537163 | 47543277 | + | Sbi_jg7558 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.34 | 79,756.30 Da | 49.86 | 76.84 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 444 | 690 | 6.69932E-127 | - |
| CDD | cd00130 | PAS | 85 | 174 | 3.36142E-10 | IPR000014 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 438 | 689 | 4.0E-65 | IPR001245 |
| Pfam | PF00989 | PAS fold | 66 | 170 | 6.1E-11 | IPR013767 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 428 | 704 | 6.92E-80 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 66 | 174 | 5.41E-17 | IPR035965 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 517 | 701 | 4.8E-59 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 60 | 177 | 2.4E-20 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 431 | 515 | 2.6E-27 | - |
| SMART | SM00091 | pas_2 | 64 | 131 | 7.3E-7 | IPR000014 |
| SMART | SM00220 | serkin_6 | 438 | 694 | 7.9E-56 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 70 | 174 | 3.7E-13 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 438 | 693 | 42.859249 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 62 | 133 | 10.328749 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 557 | 569 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 444 | 465 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 512 | 525 | 2.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 617 | 639 | 2.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 551 | 569 | 2.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 661 | 683 | 2.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 598 | 608 | 2.1E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 401 | 423 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 262 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 266 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 402 | 423 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23050.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_010676532.1 | dual specificity protein kinase shkE isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QJM6 | Serine/threonine-protein kinase CTR1 OS=Spinacia oleracea OX=3562 GN=SOVF_177990 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology