Basic Information
Locus ID:
Sbi_jg7101
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000030l | 28610218 | 28619710 | - | Sbi_jg7101 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.46 | 35,421.92 Da | 40.69 | 58.24 | -1.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 1 | 42 | 4.9E-10 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 52 | 4.37E-15 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 66 | 5.8E-17 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 222 | 11.453501 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 11 | 23 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 148 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 148 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 221 | 282 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 227 | 282 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G11850.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_042476145.1 | serine/threonine-protein kinase EDR1-like [Macadamia integrifolia] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C8ZBZ9 | Protein kinase domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 39 | Sbi_jg1104, Sbi_jg17379, Sbi_jg19072, Sbi_jg19374 ... |
| Amaranthaceae | Salicornia europaea | 3 | Seu_jg17676, Seu_jg17679, Seu_jg3882 |