Basic Information
Locus ID:
Sbi_jg63229
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000034l | 13837120 | 13839702 | - | Sbi_jg63229 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 23,937.44 Da | 29.28 | 107.15 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 1 | 173 | 2.8E-50 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 3 | 160 | 3.38E-14 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 1 | 217 | 4.0E-57 | IPR027417 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 107 | 178 | 16.332729 | IPR020587 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 1 | 97 | 13.100237 | IPR020588 |
| PRINTS | PR00142 | RecA protein signature | 116 | 144 | 6.9E-43 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 30 | 59 | 6.9E-43 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 149 | 178 | 6.9E-43 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 68 | 97 | 6.9E-43 | IPR013765 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_021724208.1 | DNA repair protein recA homolog 2, mitochondrial-like [Chenopodium quinoa] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MAJ9 | RECA_2 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology