Basic Information
Locus ID:
Sbi_jg61939
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000010l | 102630909 | 102634275 | + | Sbi_jg61939 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.77 | 113,399.95 Da | 28.11 | 100.39 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 295 | 310 | 1.7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 716 | 991 | 3.2E-46 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 537 | 596 | 1.7E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 82 | 139 | 7.5E-7 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 511 | 528 | 0.0043 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 76 | 2.1E-7 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 711 | 995 | 2.56E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 293 | 1.87E-54 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 211 | 609 | 6.04E-62 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 800 | 1016 | 4.0E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 288 | 387 | 9.7E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 185 | 287 | 4.2E-32 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 714 | 799 | 7.9E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 184 | 1.2E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 493 | 628 | 1.1E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 388 | 492 | 7.7E-21 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 342 | 366 | 84.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 102 | 125 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 294 | 318 | 68.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 511 | 535 | 77.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 126 | 150 | 260.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 714 | 995 | 3.2E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 198 | 220 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 222 | 245 | 67.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 438 | 462 | 53.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 559 | 583 | 67.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 714 | 1002 | 37.643803 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 440 | 462 | 7.00349 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 513 | 535 | 7.565642 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 845 | 857 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 720 | 744 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 514 | 527 | 6.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 583 | 596 | 6.8E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08590.1 | Leucine-rich receptor-like protein kinase family protein. similar to CLV1-like leucine rich repeat transmembrane receptor-like protein kinase (Ipomoea nil) (U77888) | 0 |
| RefSeq | XP_021772712.1 | MDIS1-interacting receptor like kinase 1-like [Chenopodium quinoa] | 0 |
| Q9FRS6 | Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana OX=3702 GN=PXL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QDZ4 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_189850 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology