Basic Information
Locus ID:
Sbi_jg61787
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
60s ribosomal protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000010l | 100501621 | 100505204 | + | Sbi_jg61787 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.94 | 20,974.23 Da | 32.22 | 78.77 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17135 | Ribosomal protein 60S L18 and 50S L18e | 2 | 186 | 3.1E-92 | IPR021131 |
| SUPERFAMILY | SSF52080 | Ribosomal proteins L15p and L18e | 20 | 139 | 2.49E-25 | IPR036227 |
| Gene3D | G3DSA:3.100.10.10 | - | 1 | 187 | 8.0E-98 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 150 | 187 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 187 | - | - |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05590.1 | ribosomal protein L18. Encodes cytoplasmic ribosomal protein L18. | 0 |
| RefSeq | XP_021772839.1 | 60S ribosomal protein L18-2 [Chenopodium quinoa] | 0 |
| P42791 | Large ribosomal subunit protein eL18y OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2 | 0 | |
| TrEMBL | A0A0J8FEI6 | Ribosomal_L18e/L15P domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_4g076000 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology