Basic Information
Locus ID:
Sbi_jg6167
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
PAPA-1-like family protein zinc finger (HIT type) family protein
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000002l | 76144193 | 76146228 | - | Sbi_jg6167 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.53 | 16,078.57 Da | 44.75 | 87.12 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04795 | PAPA-1-like conserved region | 10 | 90 | 5.9E-13 | IPR006880 |
| SMART | SM01406 | PAPA_1_2 | 9 | 90 | 1.1E-15 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 61 | - | - |
| Coils | Coil | Coil | 12 | 32 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06660.1 | PAPA-1-like family protein / zinc finger (HIT type) family protein. | 0 |
| RefSeq | XP_021774101.1 | uncharacterized protein LOC110738044 isoform X2 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803N6N4 | PAPA-1 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology