Basic Information
Locus ID:
Sbi_jg61233
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000010l | 86629410 | 86633020 | - | Sbi_jg61233 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.60 | 40,344.71 Da | 30.86 | 87.28 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 261 | 346 | 1.8E-16 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 36 | 134 | 1.1E-13 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 241 | 347 | 5.9E-27 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 227 | 333 | 3.4E-36 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 33 | 136 | 9.1E-17 | IPR038408 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 258 | 353 | 15.213144 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 31 | 137 | 15.293973 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 264 | 286 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.3 | - | 0 |
| RefSeq | XP_021845861.1 | putative receptor-like protein kinase At4g00960 [Spinacia oleracea] | 0 |
| Q8L710 | Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana OX=3702 GN=CRK17 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803L1E5 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah013997 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg61233 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg22962 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0002320, CQ.Regalona.r1.6BG0002300 |