Basic Information
Locus ID:
Sbi_jg6051
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Essential component of the cytosolic iron-sulfur (Fe S) protein assembly machinery. Required for the maturation of extramitochondrial Fe S proteins
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000002l | 72919248 | 72921424 | - | Sbi_jg6051 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.96 | 12,852.02 Da | 19.15 | 61.04 | -1.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 10 | 47 | 1.3E-6 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 9 | 58 | 4.97E-10 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 6 | 100 | 7.9E-12 | IPR015943 |
| SMART | SM00320 | WD40_4 | 8 | 48 | 2.2E-7 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 15 | 48 | 12.981398 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 15 | 48 | 10.785595 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32990.2 | - | 0 |
| RefSeq | XP_048498855.1 | protein CIA1 isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| O80990 | Protein CIA1 OS=Arabidopsis thaliana OX=3702 GN=CIA1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0J8E4S3 | WD_REPEATS_REGION domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_4g095270 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology