Basic Information
Locus ID:
Sbi_jg60501
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
protein refolding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000010l | 51153081 | 51153302 | - | Sbi_jg60501 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.96 | 7,817.71 Da | 24.47 | 63.97 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF54849 | GroEL-intermediate domain like | 11 | 53 | 8.7E-13 | IPR027410 |
| Gene3D | G3DSA:3.30.260.10 | - | 7 | 54 | 1.1E-10 | IPR027410 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56500.1 | TCP-1/cpn60 chaperonin family protein. | 0 |
| RefSeq | XP_009392770.1 | PREDICTED: ruBisCO large subunit-binding protein subunit beta, chloroplastic-like [Musa acuminata subsp. malaccensis] | 0 |
| C0Z361 | Chaperonin 60 subunit beta 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPN60B3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A392QLT9 | RuBisCO subunit binding-protein beta subunit (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg10957, Sbi_jg60501 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg24478 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl52858, Sgl58138 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G2451 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl05G2599 |