Basic Information
Locus ID:
Sbi_jg60288
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000010l | 37521685 | 37523013 | - | Sbi_jg60288 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.73 | 22,302.60 Da | 29.45 | 103.76 | 0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00141 | Peroxidase | 50 | 150 | 4.5E-20 | IPR002016 |
| SUPERFAMILY | SSF48113 | Heme-dependent peroxidases | 33 | 148 | 1.77E-31 | IPR010255 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 147 | 197 | 4.54E-10 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 152 | 202 | 9.6E-7 | - |
| Gene3D | G3DSA:1.10.520.10 | - | 34 | 151 | 9.5E-42 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 202 | 8.6267 | IPR000719 |
| ProSiteProfiles | PS50873 | Plant heme peroxidase family profile. | 33 | 164 | 28.937111 | IPR002016 |
| PRINTS | PR00458 | Haem peroxidase superfamily signature | 130 | 147 | 2.6E-7 | IPR002016 |
| PRINTS | PR00458 | Haem peroxidase superfamily signature | 65 | 79 | 2.6E-7 | IPR002016 |
| PRINTS | PR00461 | Plant peroxidase signature | 67 | 87 | 6.6E-18 | IPR000823 |
| PRINTS | PR00461 | Plant peroxidase signature | 108 | 121 | 6.6E-18 | IPR000823 |
| PRINTS | PR00461 | Plant peroxidase signature | 43 | 62 | 6.6E-18 | IPR000823 |
| PRINTS | PR00461 | Plant peroxidase signature | 129 | 139 | 6.6E-18 | IPR000823 |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G67400.1 | root hair specific 19. | 0 |
| RefSeq | XP_021714435.1 | peroxidase 50-like [Chenopodium quinoa] | 0 |
| Q43873 | Peroxidase 73 OS=Arabidopsis thaliana OX=3702 GN=PER73 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KY75 | Peroxidase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 6 | Sbi_jg15606, Sbi_jg19613, Sbi_jg27518, Sbi_jg53453 ... |
| Apiaceae | Apium graveolens | 1 | Ag7G01434 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_04.1484.V1.1, AsparagusV1_04.2628.V1.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb058250_P001 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_6_RagTag.22 |