HalophFGD

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Basic Information
Locus ID: Sbi_jg60288
Species & Taxonomic ID: Salicornia bigelovii & 46105
Genome Assembly:
Description: Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily
Maps and Mapping Data
Chromosome Start End Strand ID
ptg000010l 37521685 37523013 - Sbi_jg60288
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.73 22,302.60 Da 29.45 103.76 0.18
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00141 Peroxidase 50 150 4.5E-20 IPR002016
SUPERFAMILY SSF48113 Heme-dependent peroxidases 33 148 1.77E-31 IPR010255
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 147 197 4.54E-10 IPR011009
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 152 202 9.6E-7 -
Gene3D G3DSA:1.10.520.10 - 34 151 9.5E-42 -
ProSiteProfiles PS50011 Protein kinase domain profile. 1 202 8.6267 IPR000719
ProSiteProfiles PS50873 Plant heme peroxidase family profile. 33 164 28.937111 IPR002016
PRINTS PR00458 Haem peroxidase superfamily signature 130 147 2.6E-7 IPR002016
PRINTS PR00458 Haem peroxidase superfamily signature 65 79 2.6E-7 IPR002016
PRINTS PR00461 Plant peroxidase signature 67 87 6.6E-18 IPR000823
PRINTS PR00461 Plant peroxidase signature 108 121 6.6E-18 IPR000823
PRINTS PR00461 Plant peroxidase signature 43 62 6.6E-18 IPR000823
PRINTS PR00461 Plant peroxidase signature 129 139 6.6E-18 IPR000823
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation) GO:0006979 (response to oxidative stress)
Molecular Function:
GO:0004601 (peroxidase activity) GO:0004672 (protein kinase activity) GO:0005524 (ATP binding) GO:0020037 (heme binding)
KEGG Pathway
KO Term:
K00430 (peroxidase [EC:1.11.1.7])
Pathway:
ko00940 (Phenylpropanoid biosynthesis) map00940 (Phenylpropanoid biosynthesis) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites)
Reaction:
R00602 (Methanol + Hydrogen peroxide <=> Formaldehyde + 2 H2O) R02596 (Coniferyl alcohol <=> Guaiacyl lignin) R03919 (Sinapyl alcohol <=> Syringyl lignin) R04007 (4-Coumaryl alcohol <=> p-Hydroxyphenyl lignin) R07443 (5-Hydroxyconiferyl alcohol <=> 5-Hydroxy-guaiacyl lignin)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G67400.1 root hair specific 19. 0
RefSeq XP_021714435.1 peroxidase 50-like [Chenopodium quinoa] 0
Swiss-Prot Q43873 Peroxidase 73 OS=Arabidopsis thaliana OX=3702 GN=PER73 PE=1 SV=1 0
TrEMBL A0A803KY75 Peroxidase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Salicornia bigelovii 6 Sbi_jg15606, Sbi_jg19613, Sbi_jg27518, Sbi_jg53453 ...
Sbi_jg60288, Sbi_jg6976
Apiaceae Apium graveolens 1 Ag7G01434
Asparagaceae Asparagus officinalis 3 AsparagusV1_04.1484.V1.1, AsparagusV1_04.2628.V1.1 ...
AsparagusV1_09.1390.V1.1
Poaceae Zea mays 1 Zm00001eb058250_P001
Rhizophoraceae Bruguiera sexangula 1 evm.TU.Scaffold_6_RagTag.22
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