Basic Information
Locus ID:
Sbi_jg6024
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Polyubiquitin-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000002l | 71852885 | 71857942 | - | Sbi_jg6024 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 23,512.65 Da | 33.97 | 93.67 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 147 | 204 | 0.00472549 | - |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 148 | 204 | 1.41E-5 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 59 | 136 | 5.25E-6 | IPR029071 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_15953 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah018272 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_3g048750 |
| Amaranthaceae | Salicornia bigelovii | 9 | Sbi_jg37865, Sbi_jg37866, Sbi_jg37867, Sbi_jg6020 ... |
| Amaranthaceae | Salicornia europaea | 6 | Seu_jg28171, Seu_jg28173, Seu_jg28174, Seu_jg28175 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.3AG0008350, CQ.Regalona.r1.3BG0008450 ... |