halophFGD

Basic Information

Locus ID: Sbi_jg60228

Species & Taxonomic ID: Salicornia bigelovii & 46105

Genome Assembly:

Description: source UniProtKB

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
ptg000010l	34621097	34631270	-	Sbi_jg60228

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.36	116,437.31 Da	42.52	70.50	-0.51

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF02902	Ulp1 protease family, C-terminal catalytic domain	672	841	3.0E-12	IPR003653
SUPERFAMILY	SSF54001	Cysteine proteinases	634	843	2.94E-23	IPR038765
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	626	844	4.9E-18	-
ProSiteProfiles	PS50600	Ubiquitin-like protease family profile.	637	807	11.023415	IPR003653
MobiDBLite	mobidb-lite	consensus disorder prediction	336	367	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	336	354	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	31	89	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	73	89	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	859	878	-	-
Coils	Coil	Coil	412	439	-	-

Gene Ontology

Biological Process:

GO:0006508 (proteolysis)

Molecular Function:

GO:0008234 (cysteine-type peptidase activity)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_021767575.1	uncharacterized protein LOC110731976 isoform X1 [Chenopodium quinoa]	0
TrEMBL	A0A803KUW7	ULP_PROTEASE domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Salicornia bigelovii	103	Sbi_jg1018, Sbi_jg1323, Sbi_jg14120, Sbi_jg14340, Sbi_jg3658 ... Sbi_jg14358, Sbi_jg14422, Sbi_jg14715, Sbi_jg15292, Sbi_jg15973, Sbi_jg15974, Sbi_jg17125, Sbi_jg17341, Sbi_jg17696, Sbi_jg18172, Sbi_jg18605, Sbi_jg20068, Sbi_jg20069, Sbi_jg20829, Sbi_jg20971, Sbi_jg22016, Sbi_jg23032, Sbi_jg24312, Sbi_jg24876, Sbi_jg25632, Sbi_jg27612, Sbi_jg27649, Sbi_jg27783, Sbi_jg27794, Sbi_jg27883, Sbi_jg28336, Sbi_jg28677, Sbi_jg29003, Sbi_jg29068, Sbi_jg31876, Sbi_jg32627, Sbi_jg32907, Sbi_jg32955, Sbi_jg33022, Sbi_jg33654, Sbi_jg36012, Sbi_jg36358, Sbi_jg36540, Sbi_jg37674, Sbi_jg37820, Sbi_jg39126, Sbi_jg39446, Sbi_jg40047, Sbi_jg40762, Sbi_jg41019, Sbi_jg42089, Sbi_jg42386, Sbi_jg42663, Sbi_jg45013, Sbi_jg45051, Sbi_jg45312, Sbi_jg4601, Sbi_jg46653, Sbi_jg47617, Sbi_jg47924, Sbi_jg48681, Sbi_jg4943, Sbi_jg49763, Sbi_jg50178, Sbi_jg50626, Sbi_jg50907, Sbi_jg51018, Sbi_jg51142, Sbi_jg51229, Sbi_jg51657, Sbi_jg52584, Sbi_jg53113, Sbi_jg54099, Sbi_jg54386, Sbi_jg54653, Sbi_jg54860, Sbi_jg54934, Sbi_jg55487, Sbi_jg56230, Sbi_jg56276, Sbi_jg57499, Sbi_jg57500, Sbi_jg57520, Sbi_jg57835, Sbi_jg59091, Sbi_jg59527, Sbi_jg59534, Sbi_jg59737, Sbi_jg59852, Sbi_jg60221, Sbi_jg60228, Sbi_jg60506, Sbi_jg60691, Sbi_jg60803, Sbi_jg61116, Sbi_jg61247, Sbi_jg61438, Sbi_jg61555, Sbi_jg62837, Sbi_jg63187, Sbi_jg681, Sbi_jg7403, Sbi_jg8948