Basic Information
Locus ID:
Sbi_jg59417
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000010l | 8696090 | 8731799 | + | Sbi_jg59417 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.09 | 46,722.61 Da | 34.77 | 102.94 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 77 | 340 | 8.0E-86 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 80 | 328 | 1.33E-39 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 105 | 396 | 4.6E-89 | IPR027417 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 274 | 345 | 16.734076 | IPR020587 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 105 | 264 | 27.360838 | IPR020588 |
| PRINTS | PR00142 | RecA protein signature | 235 | 264 | 1.5E-56 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 163 | 192 | 1.5E-56 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 197 | 226 | 1.5E-56 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 283 | 311 | 1.5E-56 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 369 | 386 | 1.5E-56 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 316 | 345 | 1.5E-56 | IPR013765 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_010672926.2 | DNA repair protein recA homolog 2, mitochondrial isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RW12 | DNA repair protein recA homolog 2, mitochondrial OS=Spinacia oleracea OX=3562 GN=SOVF_021920 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology