Basic Information
Locus ID:
Sbi_jg5909
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Short Name:
LYK4
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000002l | 67445012 | 67446946 | - | Sbi_jg5909 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 70,820.71 Da | 40.07 | 88.83 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01476 | LysM domain | 191 | 232 | 0.003 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 377 | 625 | 3.1E-37 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 336 | 626 | 2.53E-60 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 425 | 637 | 2.9E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 333 | 423 | 4.7E-15 | - |
| ProSiteProfiles | PS51782 | LysM domain profile. | 185 | 231 | 9.209233 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 333 | 631 | 31.311769 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_010681194.1 | lysM domain receptor-like kinase 4 [Beta vulgaris subsp. vulgaris] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RQ17 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_041690 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology