Basic Information
Locus ID:
Sbi_jg58501
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000004l | 100468853 | 100476018 | + | Sbi_jg58501 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.96 | 36,044.27 Da | 37.11 | 89.30 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 19 | 323 | 1.5E-76 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 14 | 327 | 9.03E-83 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 5 | 323 | 2.0E-100 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 285 | 330 | 34.0 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 3 | 107 | 6.8E-8 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 6 | 325 | 48.066185 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_010679094.1 | selenocysteine Se-methyltransferase [Beta vulgaris subsp. vulgaris] | 0 |
| Q9M1W4 | Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HMT-2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QBT1 | Hcy-binding domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_197130 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology