Basic Information
Locus ID:
Sbi_jg57123
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
WD repeat-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000004l | 56031894 | 56033656 | - | Sbi_jg57123 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.10 | 11,458.64 Da | 49.92 | 74.85 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 20 | 97 | 6.96E-7 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 19 | 99 | 5.4E-12 | IPR015943 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G20540.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_039024564.1 | WD repeat-containing protein DWA2-like isoform X2 [Hibiscus syriacus] | 0 |
| Q6NPN9 | WD repeat-containing protein DWA2 OS=Arabidopsis thaliana OX=3702 GN=DWA2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B6U8U5 | WD repeat-containing protein DWA2-like OS=Gossypium australe OX=47621 GN=EPI10_009675 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 11 | Sbi_jg11027, Sbi_jg3220, Sbi_jg36147, Sbi_jg36263 ... |