Basic Information
Locus ID:
Sbi_jg56976
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Serine threonine-protein kinase AFC2-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000004l | 46198209 | 46198735 | + | Sbi_jg56976 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.57 | 12,082.86 Da | 22.17 | 87.52 | 0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 17 | 71 | 2.0E-8 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 83 | 2.82E-14 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 8 | 78 | 3.9E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 109 | 8.994184 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24740.10 | - | 0 |
| RefSeq | XP_048502409.1 | serine/threonine-protein kinase AFC2 isoform X5 [Beta vulgaris subsp. vulgaris] | 0 |
| P51566 | Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana OX=3702 GN=AFC1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7C8Z827 | Dual-specificity kinase (Fragment) OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg32289, Sbi_jg47531, Sbi_jg56976 |