halophFGD

Basic Information

Locus ID: Sbi_jg56971

Species & Taxonomic ID: Salicornia bigelovii & 46105

Genome Assembly:

Description: A Receptor for Ubiquitination Targets

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
ptg000004l	46065203	46065571	-	Sbi_jg56971

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.39	14,271.34 Da	35.77	98.20	-0.42

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00646	F-box domain	21	61	2.0E-6	IPR001810
SUPERFAMILY	SSF81383	F-box domain	19	67	5.76E-7	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	17	73	3.1E-8	-
SMART	SM00256	fbox_2	20	61	6.2E-7	IPR001810

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Atriplex hortensis	1	Ah026024
Amaranthaceae	Salicornia bigelovii	32	Sbi_jg12102, Sbi_jg12547, Sbi_jg12774, Sbi_jg12776 ... Sbi_jg12777, Sbi_jg12781, Sbi_jg14144, Sbi_jg14154, Sbi_jg14155, Sbi_jg14184, Sbi_jg20146, Sbi_jg23755, Sbi_jg25659, Sbi_jg47037, Sbi_jg47709, Sbi_jg53114, Sbi_jg53115, Sbi_jg53116, Sbi_jg53117, Sbi_jg53118, Sbi_jg53120, Sbi_jg53397, Sbi_jg53403, Sbi_jg53404, Sbi_jg53407, Sbi_jg53408, Sbi_jg53417, Sbi_jg53419, Sbi_jg53420, Sbi_jg53451, Sbi_jg56971, Sbi_jg9492
Amaranthaceae	Salicornia europaea	24	Seu_jg10045, Seu_jg10048, Seu_jg10051, Seu_jg10052 ... Seu_jg10053, Seu_jg10054, Seu_jg10055, Seu_jg10056, Seu_jg10057, Seu_jg10059, Seu_jg10061, Seu_jg19132, Seu_jg21316, Seu_jg21998, Seu_jg7686, Seu_jg8532, Seu_jg8533, Seu_jg8757, Seu_jg8759, Seu_jg8760, Seu_jg8761, Seu_jg8762, Seu_jg8763, Seu_jg8764
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00018958
Amaranthaceae	Suaeda glauca	1	Sgl34095
Amaranthaceae	Chenopodium quinoa	1	CQ.Regalona.r1.6BG0016320
Portulacaceae	Portulaca oleracea	2	evm.TU.LG18.1767, evm.TU.LG20.131