Basic Information
Locus ID:
Sbi_jg56530
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Short Name:
CERK1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000004l | 22701020 | 22717344 | + | Sbi_jg56530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 69,269.71 Da | 33.39 | 92.62 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 334 | 601 | 3.5E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 312 | 602 | 3.51E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 318 | 403 | 5.8E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 404 | 621 | 2.7E-57 | - |
| SMART | SM00220 | serkin_6 | 333 | 606 | 1.3E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 333 | 606 | 39.099602 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 339 | 361 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 448 | 460 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_021855435.1 | chitin elicitor receptor kinase 1-like isoform X2 [Spinacia oleracea] | 0 |
| A8R7E6 | Chitin elicitor receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9S1I0 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_010050 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology