Basic Information
Locus ID:
Sbi_jg5635
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
ABC transporter A family member
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000002l | 51865826 | 51868058 | + | Sbi_jg5635 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.84 | 15,803.42 Da | 59.05 | 96.05 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 10 | 100 | 1.63E-5 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 13 | 115 | 5.4E-8 | IPR027417 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41700.2 | ATP-binding cassette A1. | 0 |
| RefSeq | XP_048497584.1 | ABC transporter A family member 1 isoform X5 [Beta vulgaris subsp. vulgaris] | 0 |
| Q84M24 | ABC transporter A family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCA1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9R6R0 | ABC transporter A family member 1 OS=Spinacia oleracea OX=3562 GN=SOVF_107110 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 19 | Sbi_jg1240, Sbi_jg13942, Sbi_jg14483, Sbi_jg19568 ... |