Basic Information
Locus ID:
Sbi_jg56197
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000004l | 14250402 | 14254463 | + | Sbi_jg56197 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.94 | 75,438.40 Da | 33.96 | 93.38 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 141 | 200 | 3.5E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 65 | 8.6E-10 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 420 | 677 | 1.3E-34 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 393 | 680 | 1.59E-52 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 24 | 236 | 1.36E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 494 | 687 | 1.5E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 139 | 4.8E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 144 | 251 | 5.3E-29 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 385 | 492 | 2.0E-26 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 414 | 689 | 26.689951 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51560.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010671985.2 | probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Beta vulgaris subsp. vulgaris] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0J8CQ35 | Protein kinase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_3g055680 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology