Basic Information
Locus ID:
Sbi_jg56136
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000004l | 12931099 | 12935485 | - | Sbi_jg56136 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.56 | 115,115.58 Da | 34.95 | 97.77 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 263 | 285 | 0.11 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 287 | 346 | 3.7E-10 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 729 | 998 | 1.8E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 729 | 1001 | 1.89E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 76 | 303 | 4.08E-49 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 278 | 616 | 1.73E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 706 | 804 | 2.7E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 523 | 644 | 2.5E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 40 | 207 | 2.4E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 300 | 404 | 2.2E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 208 | 299 | 7.7E-26 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 805 | 1024 | 2.4E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 405 | 522 | 5.8E-26 | IPR032675 |
| SMART | SM00220 | serkin_6 | 726 | 1005 | 6.1E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 572 | 595 | 78.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 213 | 237 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 285 | 308 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 382 | 405 | 94.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 478 | 501 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 357 | 381 | 85.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 141 | 165 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 309 | 332 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 453 | 477 | 170.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 726 | 1013 | 38.421173 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 852 | 864 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 732 | 755 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 572 | 585 | 8.0E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 312 | 325 | 8.0E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1001 | 1043 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021842183.1 | leucine-rich repeat receptor-like protein kinase TDR [Spinacia oleracea] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RE89 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_076450 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology