Basic Information
Locus ID:
Sbi_jg5556
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000002l | 47161491 | 47166019 | - | Sbi_jg5556 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 53,812.05 Da | 47.32 | 89.14 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 162 | 424 | 1.2E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 147 | 442 | 3.14E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 133 | 235 | 5.2E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 239 | 452 | 6.0E-61 | - |
| SMART | SM00220 | serkin_6 | 162 | 426 | 1.8E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 162 | 436 | 34.308178 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 168 | 190 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 281 | 293 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 74 | 88 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 88 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 33 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18910.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_048497339.1 | receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X7 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8RXC8 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Arabidopsis thaliana OX=3702 GN=RBK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QVA5 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_137550 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology