Basic Information
Locus ID:
Sbi_jg55487
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000004l | 1687327 | 1689081 | - | Sbi_jg55487 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.71 | 48,026.50 Da | 43.55 | 80.82 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02902 | Ulp1 protease family, C-terminal catalytic domain | 367 | 417 | 6.0E-7 | IPR003653 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 298 | 420 | 1.81E-10 | IPR038765 |
| Gene3D | G3DSA:3.40.395.10 | Adenoviral Proteinase; Chain A | 290 | 427 | 6.9E-8 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 82 | - | - |
| Coils | Coil | Coil | 76 | 103 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021840786.1 | uncharacterized protein LOC110780780, partial [Spinacia oleracea] | 0 |
| TrEMBL | A0A803N632 | ULP_PROTEASE domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 103 | Sbi_jg1018, Sbi_jg1323, Sbi_jg14120, Sbi_jg14340, Sbi_jg3658 ... |