Basic Information
Locus ID:
Sbi_jg55355
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000006l | 128636629 | 128641352 | + | Sbi_jg55355 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.36 | 110,262.79 Da | 34.56 | 101.10 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 520 | 540 | 1.8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 83 | 2.1E-6 | IPR013210 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 110 | 146 | 1.9E-6 | IPR025875 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 708 | 984 | 5.1E-45 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 475 | 494 | 0.82 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 184 | 202 | 0.55 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 700 | 984 | 1.75E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 401 | 631 | 1.28E-43 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 90 | 462 | 1.77E-69 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 154 | 242 | 6.2E-27 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 679 | 783 | 9.4E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 243 | 347 | 2.5E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 153 | 1.3E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 348 | 640 | 1.5E-83 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 784 | 990 | 5.8E-57 | - |
| SMART | SM00369 | LRR_typ_2 | 494 | 518 | 8.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 133 | 157 | 48.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 206 | 230 | 50.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 303 | 326 | 32.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 707 | 985 | 3.1E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 158 | 182 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 109 | 132 | 390.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 279 | 302 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 351 | 375 | 42.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 305 | 327 | 7.203709 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 707 | 985 | 38.180893 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 828 | 840 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_021755306.1 | receptor protein kinase CLAVATA1-like [Chenopodium quinoa] | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A803N6X2 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology