Basic Information
Locus ID:
Sbi_jg55298
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000006l | 127803112 | 127812040 | - | Sbi_jg55298 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 92,766.99 Da | 54.69 | 79.69 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 659 | 768 | 2.5E-7 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 528 | 642 | 1.4E-18 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 506 | 771 | 4.35E-55 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 602 | 777 | 7.7E-29 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 236 | 347 | 2.1E-7 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 488 | 600 | 1.3E-32 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 525 | 776 | 17.630058 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 241 | 349 | 10.577829 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 531 | 553 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 187 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 198 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021756548.1 | cysteine-rich receptor-like protein kinase 27 isoform X1 [Chenopodium quinoa] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803LIS2 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 3 | gene_8411, gene_8412, gene_8413 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg39968, Sbi_jg55298 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg14367, Seu_jg14368 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000035541, gene:ENSEOMG00000049013 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0022010, CQ.Regalona.r1.1AG0022030 |