Basic Information
Locus ID:
Sbi_jg54860
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000006l | 118421959 | 118424996 | - | Sbi_jg54860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.67 | 24,311.81 Da | 50.74 | 84.74 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02902 | Ulp1 protease family, C-terminal catalytic domain | 33 | 203 | 8.3E-15 | IPR003653 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 23 | 205 | 5.69E-22 | IPR038765 |
| Gene3D | G3DSA:3.40.395.10 | Adenoviral Proteinase; Chain A | 15 | 206 | 4.8E-19 | - |
| ProSiteProfiles | PS50600 | Ubiquitin-like protease family profile. | 1 | 169 | 10.309296 | IPR003653 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021722699.1 | uncharacterized protein LOC110690175 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A0K9QYZ5 | ULP_PROTEASE domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_132170 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 103 | Sbi_jg1018, Sbi_jg1323, Sbi_jg14120, Sbi_jg14340, Sbi_jg3658 ... |