Basic Information
Locus ID:
Sbi_jg53031
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000006l | 20232127 | 20234542 | + | Sbi_jg53031 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.26 | 45,190.51 Da | 31.26 | 84.28 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 321 | 382 | 3.9E-7 | IPR001245 |
| Pfam | PF14380 | Wall-associated receptor kinase C-terminal | 158 | 232 | 2.6E-9 | IPR032872 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 26 | 89 | 1.2E-15 | IPR025287 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 298 | 385 | 2.74E-16 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 292 | 388 | 6.8E-20 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 319 | 400 | 10.449986 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 325 | 348 | - | IPR017441 |
| Coils | Coil | Coil | 156 | 176 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18390.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021867097.1 | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1 [Spinacia oleracea] | 0 |
| P0C5E2 | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.2 PE=2 SV=3 | 0 | |
| TrEMBL | A0A0K9RRZ6 | non-specific serine/threonine protein kinase OS=Spinacia oleracea OX=3562 GN=SOVF_035130 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah025649 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg53031 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000028117 |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.3BG0015890, CQ.Regalona.r1.3BG0017100 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30213440 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132639869 |