Basic Information
Locus ID:
Sbi_jg51992
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
heat shock protein
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000006l | 2739985 | 2759088 | + | Sbi_jg51992 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.94 | 89,822.24 Da | 41.07 | 79.71 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 94 | 290 | 6.10557E-102 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 108 | 268 | 4.3E-13 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 272 | 766 | 7.4E-191 | IPR001404 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 621 | 743 | 2.75E-33 | IPR037196 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 85 | 300 | 6.7E-63 | IPR036890 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 341 | 599 | 6.52E-89 | IPR020568 |
| Gene3D | G3DSA:3.30.230.80 | - | 339 | 511 | 9.4E-72 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 71 | 315 | 5.2E-90 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 512 | 598 | 2.5E-32 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 599 | 745 | 1.3E-51 | IPR037196 |
| SMART | SM00387 | HKATPase_4 | 107 | 269 | 5.2E-6 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 50 | 785 | 1.2E-240 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 105 | 114 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 257 | 274 | 1.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 173 | 190 | 1.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 155 | 172 | 1.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 276 | 294 | 1.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 85 | 105 | 1.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 202 | 224 | 1.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 106 | 128 | 1.0E-63 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 82 | 743 | 26.13439 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 325 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 750 | 795 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_021756076.1 | heat shock protein 90-5, chloroplastic-like [Chenopodium quinoa] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L7L2 | HATPase_c domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology