Basic Information
Locus ID:
Sbi_jg51578
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000011l | 7454067 | 7454516 | + | Sbi_jg51578 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.72 | 16,825.84 Da | 35.30 | 85.64 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 63 | 139 | 2.5E-7 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 30 | 143 | 3.22E-18 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 13 | 127 | 4.1E-20 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 55 | 149 | 9.983564 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G59700.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010535512.1 | PREDICTED: receptor-like protein kinase HERK 1 [Tarenaya hassleriana] | 0 |
| Q9FN92 | Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana OX=3702 GN=At5g59700 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1J3F5B3 | Receptor-like protein kinase HERK 1 (Fragment) OS=Noccaea caerulescens OX=107243 GN=LC_TR16365_c2_g1_i1_g.56090 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 6 | Ah006924, Ah025967, Ah029039, Ah029060, Ah029069, Ah029072 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg51577, Sbi_jg51578 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000020759 |
| Asteraceae | Flaveria trinervia | 1 | Ftri1G08520 |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G2172, Ceq01G2211 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl01G2412, Cgl01G2458 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno07g04300 |
| Hydrocharitaceae | Thalassia testudinum | 32 | gene.Thate01g01650, gene.Thate01g01660, gene.Thate01g01680 ... |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_3AG0250360 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG008820, gene_TRIDC2BG010620 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-58004 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_11_RagTag.413, evm.TU.Scaffold_6_RagTag.1830 |
| Zosteraceae | Zostera marina | 2 | Zosma04g11040.v3.1, Zosma06g12330.v3.1 |