Basic Information
Locus ID:
Sbi_jg51200
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000012l | 24116022 | 24121316 | + | Sbi_jg51200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.46 | 26,918.81 Da | 37.31 | 91.41 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11660 | SANT_TRF | 175 | 207 | 1.19806E-10 | - |
| Pfam | PF00069 | Protein kinase domain | 4 | 66 | 1.1E-12 | IPR000719 |
| SUPERFAMILY | SSF46689 | Homeodomain-like | 166 | 213 | 5.19E-7 | IPR009057 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 140 | 1.43E-22 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 147 | 1.0E-28 | - |
| Gene3D | G3DSA:1.10.246.220 | - | 165 | 240 | 1.8E-11 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 151 | 12.923436 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11050.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021763726.1 | probable receptor-like protein kinase At1g11050 [Chenopodium quinoa] | 0 |
| O04086 | Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana OX=3702 GN=At1g11050 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803N654 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 19 | Sbi_jg1240, Sbi_jg13942, Sbi_jg14483, Sbi_jg19568 ... |