halophFGD

Basic Information

Locus ID: Sbi_jg50491

Species & Taxonomic ID: Salicornia bigelovii & 46105

Genome Assembly:

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
ptg000026l	21800886	21801134	+	Sbi_jg50491

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.03	9,146.38 Da	64.02	102.32	0.07

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00646	F-box domain	25	60	4.9E-6	IPR001810
SUPERFAMILY	SSF81383	F-box domain	23	71	1.7E-8	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	15	65	1.1E-5	-
ProSiteProfiles	PS50181	F-box domain profile.	23	73	8.649649	IPR001810

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G47915.1	F-box family protein.
RefSeq	XP_021751480.1	F-box/FBD/LRR-repeat protein At5g22660-like [Chenopodium quinoa]
Swiss-Prot	Q3E6X9	Putative F-box protein At1g47915 OS=Arabidopsis thaliana OX=3702 GN=At1g47915 PE=4 SV=1
TrEMBL	G7LGL6	F-box/RNI/FBD-like domain protein OS=Medicago truncatula OX=3880 GN=MTR_8g014180 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Salicornia bigelovii	3	Sbi_jg40480, Sbi_jg50491, Sbi_jg50492
Amaranthaceae	Salicornia europaea	1	Seu_jg2070