Basic Information
Locus ID:
Sbi_jg50403
Species & Taxonomic ID:
Salicornia bigelovii & 46105
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000026l | 20204504 | 20209170 | - | Sbi_jg50403 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.23 | 74,622.88 Da | 46.89 | 94.20 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 391 | 641 | 1.1E-15 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 98 | 157 | 6.0E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 70 | 6.5E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 390 | 641 | 9.5E-31 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 176 | 2.24E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 208 | 1.8E-40 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 461 | 648 | 2.1E-25 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 353 | 459 | 6.3E-14 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 377 | 646 | 13.85628 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 305 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 261 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 305 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.2 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010686215.2 | protein MALE DISCOVERER 1 [Beta vulgaris subsp. vulgaris] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803ME01 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology